BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C12LP1|AL425512
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1937 0.0
3x_Contig1729 354 2e-97
>3x_Contig1802
Length = 45229
Score = 1937 bits (973), Expect = 0.0
Identities = 986/993 (99%), Gaps = 1/993 (0%)
Strand = Plus / Plus
Query: 1 tggatatcttgggtaagaatacagaaaacaaatactatgattggaagaaatatattaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14165 tggatatcttgggtaagaatacagaaaacaaatactatgattggaagaaatatattaatg 14224
Query: 61 ttactggaaatacaatttgcggtgagcgacctattggggtattcttgtgtgctatgtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14225 ttactggaaatacaatttgcggtgagcgacctattggggtattcttgtgtgctatgtcac 14284
Query: 121 tgttgaacaaaccatatcagtttaattgggctcattactcacaaagcagtcaatgcgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14285 tgttgaacaaaccatatcagtttaattgggctcattactcacaaagcagtcaatgcgttg 14344
Query: 181 atttagaggatagcagtgtaagcyatgcatctggatacttctagttgattatctagtctt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 14345 atttagaggatagcagtgtaagctatgcatctggatacttctagttgattatctagtctt 14404
Query: 241 tatgtgtaaactgtttatgaaagamattagttcgattaataataatgaacacgattacct 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 14405 tatgtgtaaactgtttatgaaagaaattagttcgattaataataatgaacacgattacct 14464
Query: 301 attggtataacatggttagaaaaccgttttattaataaattctacgtagttatgtggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14465 attggtataacatggttagaaaaccgttttattaataaattctacgtagttatgtggaat 14524
Query: 361 catgaaaagtagattaacatagttgggacattaattgctcagcaatgaaggggttggttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14525 catgaaaagtagattaacatagttgggacattaattgctcagcaatgaaggggttggttg 14584
Query: 421 gattaaagataaagamagtmagayattttcaatagtaattttatcaggaaaatatcaatt 480
||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 14585 gattaaagataaagaaagtaagatattttcaatagtaattttatcaggaaaatatcaatt 14644
Query: 481 acatcaacctctttagttcttagcaacaagttcgaccaaatcgacgactctggtagagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14645 acatcaacctctttagttcttagcaacaagttcgaccaaatcgacgactctggtagagta 14704
Query: 541 accgtattcgttgtcgtaccaggtaaccaacttaacgaactttggagacaattggatacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14705 accgtattcgttgtcgtaccaggtaaccaacttaacgaactttggagacaattggatacc 14764
Query: 601 ggcagcagcatcgaagatggaagagttggtgtcacccaagaagtcagaggagacaacagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14765 ggcagcagcatcgaagatggaagagttggtgtcacccaagaagtcagaggagacaacagc 14824
Query: 661 atcttcagtgt-acccaagatacccttcaattcgttttcagaggccttcttgatgacagc 719
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14825 atcttcagtgtaacccaagatacccttcaattcgttttcagaggccttcttgatgacagc 14884
Query: 720 cttgatttcatcgtaggtagcttccttggccaacttgacagtcaagtcaacaacggagac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14885 cttgatttcatcgtaggtagcttccttggccaacttgacagtcaagtcaacaacggagac 14944
Query: 780 atcgacggttgggactctgaaagccataccggtcaacttaccttgcaattctggcaagac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14945 atcgacggttgggactctgaaagccataccggtcaacttaccttgcaattctggcaagac 15004
Query: 840 cttaccgacagccttagcagcaccagtagaggatggaatgatgttaccggaagcggttct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15005 cttaccgacagccttagcagcaccagtagaggatggaatgatgttaccggaagcggttct 15064
Query: 900 accacctctccagtccttttgggatggaccatcaacagtcttttgggtagcggtgatgga 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15065 accacctctccagtccttttgggatggaccatcaacagtcttttgggtagcggtgatgga 15124
Query: 960 gtggatggtggacatcaaacmttcttcgatacc 992
|||||||||||||||||||| ||||||||||||
Sbjct: 15125 gtggatggtggacatcaaaccttcttcgatacc 15157
>3x_Contig1729
Length = 15481
Score = 354 bits (178), Expect = 2e-97
Identities = 226/242 (93%)
Strand = Plus / Plus
Query: 718 gccttgatttcatcgtaggtagcttccttggccaacttgacagtcaagtcaacaacggag 777
||||||||||||||||| || |||||||| ||||||||||| ||||| ||||| || ||
Sbjct: 13737 gccttgatttcatcgtaagtggcttccttagccaacttgacggtcaaatcaacgacagaa 13796
Query: 778 acatcgacggttgggactctgaaagccataccggtcaacttaccttgcaattctggcaag 837
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 13797 acatcgacggttgggactctgaaagccataccggtcaatttaccttgcaattctggcaag 13856
Query: 838 accttaccgacagccttagcagcaccagtagaggatggaatgatgttaccggaagcggtt 897
|| ||||||||||||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 13857 actttaccgacagccttagcagcaccagtagaggatgggataatgttaccggaagcagtt 13916
Query: 898 ctaccacctctccagtccttttgggatggaccatcaacagtcttttgggtagcggtgatg 957
|||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct: 13917 ctaccacctctccagtccttgtgggatggaccatcaacagtcttttgagtagcagtgatg 13976
Query: 958 ga 959
||
Sbjct: 13977 ga 13978
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6662
Number of Sequences: 1807
Number of extensions: 6662
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 2
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)